Brain Map - brain-map.org
Multiscale datasets and publications uncover how the brain is wired. Explore. Computational Modeling & Theory. Use of brain-wide, circuit-level and cell-level biophysical models, modeling tools and publications. Explore. Gene Expression. Highlights and insights into gene expression, viewed through Allen Brain Atlas datasets and publications ...
Overview - brain-map.org
An overview of open data, lab resources, analysis tools, and more from the Allen Institute for Brain Science.
Anatomy - brain-map.org - Allen Brain Atlas
Among our most widely cited resources, these neuroanatomical atlases include mouse brain & spinal cord, and human brain across multiple developmental timepoints. Below are resources for our reference atlases and accompanying software tools.
Gene Expression - brain-map.org - Allen Brain Atlas
These open resources explore where genes in the brain are expressed in both global and local context, and how this expression changes during development and in aging and disease. For studies of gene expression in the context of cell types, please visit our cell types page.
Allen Brain Cell Atlas - brain-map.org
The Allen Brain Cell (ABC) Atlas provides a platform for visualizing multimodal single cell data across the mammalian brain and aims to empower researchers to explore and analyze multiple whole-brain datasets simultaneously.
ALLEN BRAIN ATLAS API - Allen Brain Map Community Forum
2024年1月8日 · ALLEN BRAIN ATLAS API Experimental Overview and Metadata Supplemental RNA-Sequencing Data Downloading Expression Values Differential Search Correlative Search Magnetic Resonance Imaging The Allen Human Brain Atlas is a multimodal atlas of the human brain that integrates anatomic and microarray-based gene expression information.
Allen Reference Atlases :: Atlas Viewer
The Allen Brain Explorer (beta) is an application that allows users to browse multimodal datasets in an annotated 3D spatial framework. It is created from a 3D volumetric reference atlas, annotated symmetrically using image data averaged from 1,675 adult mouse brain specimens.
Connectivity - brain-map.org - Allen Brain Atlas
Mouse Brain Connectivity Atlas. A brain-wide map of neural projections, including cell class-specific data. View Data. MICrONS Explorer. Large scale electron microscopy based reconstructions of cortical circuitry from mouse visual cortex, with corresponding functional imaging. View Data. Synaptic Physiology
Cell Taxonomies - brain-map.org - Allen Brain Atlas
MapMyCells allows scientists worldwide to assign cell types to their own transcriptomics and spatial data by comparing their data to mouse and human brain reference taxonomies derived by the Allen Institute for Brain Science and BICAN.
ABC Atlas User Guide - Allen Brain Map Community Forum
2024年3月21日 · The ABC Atlas aims to empower researchers worldwide to explore and analyze multiple whole-brain datasets simultaneously. As the Allen Institute and its collaborators continue to add new modalities, species, and insights …